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Apps / Books Sync: FreeAgent & Sage

Books Sync: FreeAgent & Sage

Waiting for Shopify’s review

Each morning, yesterday’s Shopify orders go into FreeAgent or Sage Accounting as one tidy entry, split by VAT rate, and each Shopify Payments payout lands with the fees already taken off. No CSV exports, no splitting payouts by hand. Built on Shopify’s, FreeAgent’s and Sage’s public APIs.

From $12 a month14-day free trialNever copies customers’ names

Shopify, yesterday
Orders and payout
SalesEach VAT rate
ShippingEach VAT rate
RefundsAs they happened
PayoutShopify Payments, fees taken off
FreeAgent or Sage
Sales invoice: Shopify 2026-11-08
Salesits VAT rate
Shippingits VAT rate
Status
Shopify Payments payout
FeesAn expense
TransferThe amount that reaches your bank
Books Sync: FreeAgent & Sage, shown with example details.
Starter$12 a monthup to 300 orders a month
Growth$24 a monthup to 1,500 orders a month

14-day free trial. Billed by Shopify in US dollars, cancel any time.

Tell me when it’s ready

Or email support@supportlabs.co.uk

What lands in your books each day

From ShopifyYesterday’s ordersIn FreeAgent or SageOne sales invoice a day (“Shopify 2026-11-08”), with lines for sales, shipping, gift cards sold and tips at each VAT rate, marked paid by how customers paid (Shopify Payments, PayPal, other)
From ShopifyYesterday’s refundsIn FreeAgent or SageOne credit note a day, refunded the same way
From ShopifyA Shopify Payments payoutIn FreeAgent or SageThe fees as an expense, and a transfer to your bank for exactly the amount that arrives, so the bank feed matches straight away
From ShopifyAn order paid later (bank transfer, payment terms)In FreeAgent or SageGoes on the day it is paid
From ShopifySomething unusual: a chargeback, import duties, a refund onto a gift cardIn FreeAgent or SageWe don’t guess: it is flagged in the app and, if you like, by email

Everything it moves

From Shopify (read only)

  • Order amounts and VAT
  • Payments and refunds
  • Shopify Payments payouts and fees
  • Never customers’ names, emails or addresses

Into FreeAgent or Sage

  • One sales invoice a day, marked paid
  • One credit note a day for refunds
  • Payout fees as an expense
  • A transfer for each payout to your bank

How set-up will work

You need a Shopify shop and a FreeAgent or Sage Accounting account.

  1. Install it from the Shopify App Store, once Shopify has reviewed it.
  2. Connect FreeAgent or Sage Accounting.
  3. Choose your sales, shipping and gift card accounts, and add a “Shopify clearing” bank account. The app shows you how.
  4. Pick the first day to send. After 3am each day, the day before goes across.
Starter$12 a monthup to 300 orders a month
Growth$24 a monthup to 1,500 orders a month

14-day free trial. Billed by Shopify in US dollars, cancel any time.

Tell me when it’s ready

Or email support@supportlabs.co.uk

Your data

Reads
Order amounts, VAT and payments in Shopify. Never your customers’ names, emails or addresses
Writes
Daily sales invoices, credit notes, payout fees and transfers in FreeAgent or Sage. Nothing in Shopify
Keeps
Your Shopify and accounting sign-ins, encrypted, and what was already sent so nothing is sent twice
Deletes
Everything we hold for your store, when you press “Disconnect and delete my data” or uninstall the app. Entries already in your accounts stay

Questions

FreeAgent used to link to Shopify. What happened?

FreeAgent switched off its own Shopify link on 30 April 2025 and now tells users to split payouts by hand. This app fills that gap.

Does Sage Accounting link to Shopify?

Sage Accounting has no built-in Shopify link. This app fills that gap.

Will my customers’ names end up in my books?

No. It only reads order amounts, VAT and payments. It never reads or copies your customers’ names, emails or addresses, and it never changes anything in Shopify.

Does it work with QuickBooks?

Not now. QuickBooks may come later, but we’re not promising it.

Is it on the Shopify App Store yet?

Not yet. It’s waiting for Shopify’s review. Email us and we’ll tell you when it’s ready.

More questions about Books Sync: FreeAgent & Sage

Help with Books Sync: FreeAgent & Sage

Email or ring with any question, before or after you start. You’ll hear back from Oliver, who builds the apps.

Email support@supportlabs.co.uk

Phone 07725 521854

We reply within one working day.